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Dubcovsky Lab
Resources for Wheat Genetics & Breeding

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Spatial Transcriptomic

Breadcrumb

  • Home
  • Spatial Transcriptomic

Datasets:

  • Pictures with section names and developmental stages: SectionNames_DevStages_Pictures.pptx
  • Image files: A1-1, A1-2, A2-1, A2-2, B1-3, B1-4, B2-4, B2-5, C1-1, C2-3, C2-4, D1-1, D1-2, D2-1, D2-2.
  • Selected gene coordinates: AP3, AGs, bZIPCs, FT-A2, FULs, LFY, PI.1, SEPs, VRN1, WAPO1.

Software and Plugin:

  • ImageJ2 Windows
  • ImageJ2 Mac

 

  • ImageJ2 User Guide
  • Polylux User Guide

 

  • Single cell data visualization
  • Single cell 3D clusters visualization
  • Wheat spike simFISH gene expression heatmap
  • Wheat spike imputed gene expression heatmap

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