We study the spike development in the tetraploid Triticum turgidum ssp. durum cv. Kronos. Single-cell and spatial transcriptomics data and tools generated (Xu et al. 2025) are available through the links below.
Expression of 99 genes obtained from single-molecule fluorescence in situ hybridization (smFISH) for wheat apex at 3 stages (early transition (W1.5), late double ridge (W2.5) and floret primordia (W3.5) stages
Single-cell gene expression data imputed for cells in single-molecule fluorescence in situ hybridization (smFISH) for wheat apex at 2 stages (late double ridge (W2.5) and floret primordia (W3.5) stages
3D representation of the single-cell data clusters.
Cellular information, gene expression and co-expression of the single cell dataset can also be explored through the ShinyApp.
The data and scripts are available on Zenodo.
